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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13202291 chr6:27698857 A/G ZFP57 chr6:29640169-29648887:- 0.65 6.3 8.27E-10 Box Plot
BLCA rs13202295 chr6:27698837 C/T ZFP57 chr6:29640169-29648887:- 0.73 6.88 2.38E-11 Box Plot
BLCA rs1320375 chr8:27787224 A/T CNOT7 chr8:17082473-17104387:- 0.9 6.74 5.88E-11 Box Plot
BLCA rs1320375 chr8:27787224 A/T XPO7 chr8:21777182-21864096:+ 0.97 7.29 1.82E-12 Box Plot
BLCA rs13203816 chr6:28079598 T/C ZFP57 chr6:29640169-29648887:- 0.76 6.83 3.43E-11 Box Plot
BLCA rs13204012 chr6:28201531 G/A ZFP57 chr6:29640169-29648887:- 0.77 6.94 1.69E-11 Box Plot
BLCA rs13205211 chr6:28203056 T/G ZFP57 chr6:29640169-29648887:- 0.77 6.94 1.69E-11 Box Plot
BLCA rs13205911 chr6:28124114 C/T ZFP57 chr6:29640169-29648887:- 0.74 6.2 1.44E-9 Box Plot
BLCA rs13207371 chr6:26591074 G/A ZNF322B chr9:99957633-99961910:- 0.55 9.83 1.78E-20 Box Plot
BLCA rs13208096 chr6:28225311 C/G ZFP57 chr6:29640169-29648887:- 0.74 6.97 1.36E-11 Box Plot
BLCA rs13212318 chr6:27688841 A/C ZFP57 chr6:29640169-29648887:- 0.65 6.3 8.27E-10 Box Plot
BLCA rs13212871 chr6:4907284 C/G CT47A9 chrX:120077415-120080737:- -0.22 -7.61 2.12E-13 Box Plot
BLCA rs13213152 chr6:28349698 A/G ZFP57 chr6:29640169-29648887:- 0.73 6.65 9.93E-11 Box Plot
BLCA rs13213953 chr6:26594534 T/A ZNF322B chr9:99957633-99961910:- 0.53 9.43 4.13E-19 Box Plot
BLCA rs13213986 chr6:28358009 T/A ZFP57 chr6:29640169-29648887:- 0.75 6.82 3.55E-11 Box Plot